Elsevier S & T

Nano Biophotonics: Science and Technology

Masuhara, Hiroshi; Kawata, Satoshi; Tokunaga, Fumio

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Table of contents
  • Front CoverCover
  • Nano Biophotonicsiii
  • Copyright Pageiv
  • Table of Contentsxiii
  • Prefacev
  • Organization of the Symposiumvi
  • Participants listvii
  • Group Photograph of the Symposiumxi
  • Part I: Nano Bio Spectroscopy1
  • Chapter 1: Single molecule nano-bioscience: Fluctuations and adaptive biological molecular machines3
  • 1. SINGLE MOLECULE IMAGING4
  • 2. IMAGING MOVEMENT AND CHEMICAL REACTION OF MOLECULAR MOTORS6
  • 3. SINGLE MOLECULE SPECTROSCOPY AND DYNAMIC STRUCTURES OF BIOMOLECULES7
  • 4. IMAGING SINGLE MOLECULES IN LIVE CELLS9
  • 5. Single molecule manipulation and mechanical properties of biomolecules11
  • 6. NON-PROCESSIVE MYOSIN, MUSCLE MYOSIN13
  • 7. MECHANISM OF MOLECULAR MOTORS: PROCESSIVE KINESIN MOTOR15
  • 8. PROCESSIVE MYOSIN MOTOR, MYOSIN V AND VI18
  • 9. CONCLUSIONS20
  • REFERENCES20
  • Chapter 2: Alternating laser excitation spectroscopy of freely diffusing single molecule: Applicatio23
  • 1. INTRODUCTION23
  • 2. THEORETICAL AND THECHNICAL BACKGROUND25
  • 3. RESULTS AND DISCUSSION31
  • 4. SUMMERY41
  • ACKNOWLEDGEMENTS41
  • REFERENCES41
  • Chapter 3: Linear and non-linear Raman microspectroscopy and imaging of single living cells: Visuali43
  • 1. INTRODUCTION43
  • 2. IN VIVO REAL-TIME PURSUIT OF THE CELL ACTIVITY OF SINGLE LIVING FISSION YEAST CELLS BY TIME- AND44
  • 3. IN VIVO TIME-RESOLVED RAMAN IMAGING OF A SPONTANEOUS DEATH PROCESS OF A SINGLE BUDDING YEAST CELL48
  • 4. NON-LINEAR RAMAN MICROSPECTROSCOPY AND IMAGING OF SINGLE LIVING CELLS50
  • 5. CONCLUSIONS55
  • ACKNOWLEDGEMENTS55
  • REFERENCES55
  • Chapter 4: Raman, CARS and near-field Raman-CARS microscopy for cellular and molecular imaging57
  • 1. INTRODUCTION57
  • 2. SLIT-SCANNING RAMAN MICROSCOPY FOR CELLULAR IMAGING58
  • 3. TIP-ENHANCED RAMAN SPECTROSCOPY60
  • 3. TERS ANALYSIS OF DNA-BASED ADENINE MOLECULES61
  • 4. TIP ENHANCED NONLINEAR OPTICAL SPECTROSCOPY64
  • REFERENCES70
  • Chapter 5: Enhanced photothermal spectroscopy for observing chemical reactions in biological cells73
  • 1. SENSITIVE DETECTION OF NONFLUORESCENT BIOMOLECULES73
  • 2. PHOTOTHERMAL SIGNAL ENHANCEMENT75
  • 3. ULTRAVIOLET-EXCITATION MICROSCOPIC THERMAL LENS MEASUREMENTS79
  • 4. MICROSCOPIC THERMAL LENS MEASUREMENTS WITH A MODE-LOCKED LASER85
  • 5. SUMMARY90
  • ACKNOWLEGEMENTS90
  • REFERENCES90
  • Chapter 6: Probing conformational dynamics in biopolymers by contact-induced fluorescence quenching93
  • 1. INTRODUCTION93
  • 2. SELECTIVE FLUORESCENCE QUENCHING OF ORGANIC FLUOROPHORES BY PHOTOINDUCED ELECTRON TRANSFER REACTI94
  • 3. MONITORING POLYMER DYNAMICS USING PET-PROBES99
  • 4. MONITORING PROTEIN FOLDING USING PET-PROBES103
  • 5. DESIGN AND DIAGNOSTIC APPLICATIONS OF PET-PROBES105
  • 6. CONCLUSION AND OUTLOOK111
  • REFERENCES112
  • Chapter 7: Second harmonic generation imaging microscopy of fibrillar structures115
  • 1. INTRODUCTION115
  • 2. EXPERIMENTAL METHODS117
  • 3. RESULTS AND DISCUSSION118
  • 4. SUMMARY129
  • ACKOWLEDGMENT129
  • REFERENCES129
  • Part II: Nano Bio Dynamics131
  • Chapter 8: Imaging of enzyme catalysis by wide field microscopy133
  • ABSTRACT133
  • 1. INTRODUCTION133
  • 2. EXPERIMENTAL SECTION135
  • 3. RESULTS AND DISCUSSION136
  • 4. CONCLUSIONS140
  • ACKNOWLEDGMENTS140
  • REFERENCES141
  • Chapter 9: Interferometric detection and tracking of nanoparticles143
  • 1. INTRODUCTION143
  • 2. DETECTION OF GOLD NANOPARTICLES145
  • 3. DETECTION OF DIELECTRIC OBJECTS154
  • 4. TRACKING OF GOLD NANOPARTICLES155
  • 5. CONCLUSION157
  • ACKNOWLEDGEMENT157
  • REFERENCES158
  • Chapter 10: Interaction between metal-free porphine and surface Ag atoms through temporal fluctuatio161
  • 1. INTRODUCTION161
  • 2. EXPERIMENTAL163
  • 3. RESULTS163
  • 4. DISCUSSION168
  • 5. CONCLUSIONS172
  • ACKNOWLEDGMENTS173
  • REFERENCES173
  • Chapter 11: General importance of anomalous diffusion in biological inhomogeneous systems175
  • 1. INTRODUCTION175
  • 2. GENERAL DESCRIPTION OF ANOMALOUS DIFFUSION176
  • 3. RELATIONSHIP OF THE OBSERVED DIFFUSION COEFFICIENT (DOBS) WITH THE SAMPLING FUNCTIONS OF EACH EXP179
  • 4. DIFFERENTIATION OF MSD AND ANOMALOUS DIFFUSION COEFFICIENT181
  • 5. EXAMPLES OF DIFFUSIOMETRY FOR INHOMOGENEOUS SYSTEM WITH ANOMALOUS DIFFUSION182
  • 6. GENERAL IMPORTANCE OF ANOMALOUS DIFFUSION IN MATERIAL TRANSPORTS IN EXTRACELLULAR MATRICES (ECM)185
  • 7. CONCLUSIONS187
  • ACKNOWLEDGEMENTS187
  • REFERENCES187
  • Chapter 12: Two-color picosecond time-resolved infrared super-resolution microscopy189
  • 1. INTRODUCTION189
  • 2. EXPERIMENTAL191
  • 3. RESULTS AND DISCUSSION193
  • 4. CONCLUSION194
  • ACKNOWLEDGMENT195
  • REFERENCES195
  • Chapter 13: Molecular motion under the trapping potential of optical tweezers197
  • 1. INTRODUCTION197
  • 2. EXPERIMENTAL198
  • 3. DATA ANALYSIS OF FLUORESCENCE CORRELATION SIGNALS199
  • 4. EFFECT OF NEAR INFRARED LASER IRRADIATION ON TRANSLATIONAL MOTION OF MOLECULES IN SOLUTION202
  • 5. SUMMARY204
  • ACKNOWLEDGMENT205
  • REFERENCES205
  • Chapter 14: Nanoscale fluid motion via molecular pores and polymer actuators207
  • 1. ABSTRACT207
  • 2. INTRODUCTION208
  • 3. METHODS209
  • 4. RESULTS213
  • 5. DISCUSSION219
  • ACKNOWLEGEMENTS222
  • REFERENCES222
  • Part III: Nano Bio Processing225
  • Chapter 15 Femtosecond nonlinear processing in solution: From crystallization to manipulation and pa227
  • 1. INTRODUCTION227
  • 2. CRYSTAL GROWTH TRIGGERED BY FEMTOSECOND LASER ABLATION228
  • 3. FEMTOSECOND LASER-INDUCED CRYSTALLIZATION OF PROTEINS AND MOLECULES230
  • 4. MANIPULATION OF SINGLE BEADS BY FEMTOSECOND LASER-INDUCED BUBBLING233
  • 5. PATTERNING OF PROTEIN CUBES AND BIO CELLS IN SOLUTION BY FEMTOSECOND LASER-INDUCED SHOCKWAVE AND235
  • 6. FEMTOSECOND LASER-INDUCED INJECTION OF NANO PARTICLES INTO SINGLE BIO CELLS237
  • 7. FEMTOSECOND NONLINEAR PROCESSES AND MECHANICAL EFFECTS239
  • ACKNOWLEDGEMENTS242
  • REFERENCES242
  • Chapter 16: Single living cell processing in water medium using focused femtosecond laser-induced sh245
  • 1. INTRODUCTION245
  • 2. SAMPLE AND MICROSCOPE246
  • 3. SHOCKWAVE AND CAVITATION BUBBLE GENERATION PROCESSES247
  • 4. MOTIONS OF SINGLE ANIMAL CELL CULTURED ON A SUBSTRATE248
  • 5. REGENERATION PROCESS OF CELL MONITORED BY TOTAL INTERNAL REFLECTION FLUORESCENECE IMAGING250
  • 6. DIRECT CUTTING OF SINGLE ACTIN STRESS FIBRE252
  • 7. CONCLUSION253
  • ACKNOWLEDGEMENTS254
  • REFERENCES254
  • Chapter 17: Subcellular effects of femtosecond laser irradiation255
  • 1. INTRODUCTION255
  • 2. CELL-LEVEL EFFECTS INDUCED BY LASER IRRADIATION257
  • 3. CONCLUSION271
  • REFERENCES271
  • Chapter 18 Femtosecond laser nanosurgery of biological cells and tissues273
  • 1. INTRODUCTION273
  • 2. PLASMA FORMATION273
  • 3. IRRADIANCE AND FREE ELECTRON DISTRIBUTION WITHIN THE FOCAL VOLUME274
  • 4. CHEMICAL EFFECTS OF LOW-DENSITY PLASMAS275
  • 5. THERMAL EFFECTS276
  • 6. THERMOELASTIC STRESS EVOLUTION278
  • 7. BUBBLE FORMATION279
  • 8. EXPERIMENTAL DETERMINATION OF BREAKDOWN THRESHOLD AND BUBBLE SIZE282
  • 9. IMPLICATIONS FOR LASER EFFECTS ON CELLS AND TISSUES285
  • REFERENCES286
  • Chapter 19: Femtosecond laser nanomachining of silicon wafers and two-photon nanolithography for ste287
  • 1. INTRODUCTION287
  • 2. MATERIALS AND METHODS288
  • 3. RESULTS291
  • 4. CONCLUSIONS293
  • ACKNOWLEDGEMENTS296
  • REFERENCES296
  • Chapter 20: Gold nanorods: application to bioscience and medicine297
  • 1. INTRODUCTION OF GOLD NANORODS297
  • 2. BIOCOMPARTIBLE GOLD NANORODS301
  • 3. BIODISTRIBUTION OF GOLD NANORODS305
  • 4. CONCLUSION306
  • REFERENCES306
  • Part IV: Nano Bio Devices309
  • Chapter 21: Protein modules: Functional proteins incorporated in viral polyhedra311
  • 1. INTRODUCTION311
  • 2. EXPERIMENTAL314
  • 3. IMMOBILIZATION OF EGFP AND CDMP1 PROTEINS317
  • 4. EVALUATION OF PROTEINS IN POLYHEDRA BY TIME-RESOLVED FLUORESCENCE319
  • 5. CONCLUDING REMARKS322
  • ACKNOWLEDGEMENT323
  • REFERENCES323
  • Chapter 22: Immobilization of protein molecules into insect viral occlusion body and its application325
  • 1. CYTOPLASMIC POLYHEDROSIS VIRUS325
  • 2. IMMOBILIZATION OF PROTEIN MOLECULES INTO POLYHEDRA327
  • 3. PROTEIN MICROARRAYS328
  • 4. SCAFFOLD FOR CELL PROLIFERATION329
  • REFERENCES331
  • Chapter 23: All-optical switching in rhodopsin proteins333
  • 1. INTRODUCTION333
  • 2. THEORETICAL MODEL337
  • 3. ALL-OPTICAL SWITCHING WITH CW PUMP BEAMS339
  • 4. ALL-OPTICAL SWITCHING WITH PULSED PUMP BEAM343
  • CONCLUSION350
  • REFERENCES353
  • Chapter 24: A photoisomerization study on photoactive yellow protein model chromophores from solutio357
  • 1. INTRODUCTION357
  • 2. PYP MODEL CHROMOPHORES359
  • 3. DENATURED PYP364
  • 4. PHOTOISOMERIZATION OF PCT IN CRYSTALLINE STATE365
  • 5. CONCLUSION AND PERSPECTIVE369
  • ACKNOWLEDGEMENTS370
  • REFERENCES370
  • Chapter 25: Defect mode and laser action in cholesteric liquid crystal373
  • 1. INTRODUCTION373
  • 2. PHOTONIC BAND GAP AND BAND EDGE LASING IN CHOLESTERIC LIQUID CRYSTAL375
  • 3. TWIST DEFECT MODE IN CHOLESTERIC LIQUID CRYSTAL377
  • 4. CHIRAL DEFECT MODE INDUCED BY PARTIAL DEFORMATION OF HELIX379
  • 5. TUNABLE DEFECT MODE LASING IN A PERIODIC STRUCTURE CONTAINING LC LAYER AS A DEFECT380
  • 6. SUMMARY384
  • ACKNOWLEDGEMENTS385
  • REFERENCES385
  • Chapter 26: Integrated photonic devices using semiconductor quantum-well structures387
  • 1. INTRODUCTION387
  • 2. AREA-SELECTIVE QUANTUM-WELL DISORDERING388
  • 3. GRATING COMPONENTS FOR SEMICONDUCTOR INTEGRATED PHOTONIC DEVICES390
  • 4. DBR LASERS USING CURVED SURFACE GRATING393
  • 5. MONOLITHIC MOPA WITH INTEGRATED OUTCOUPLER398
  • 6. TUNABLE EXTENDED-CAVITY LASER403
  • 7. GRATING-COUPLED SURFACE-EMITTING LASER406
  • 8. CONCLUSION408
  • REFERENCES408
  • Chapter 27: Process control and new developments in crystal growth from solution: oxide, organic, pr411
  • 1. INTRODUCTION411
  • 2. GROWTH OF HIGH QUALITY CSLIB6O10 CRYSTAL412
  • 3. GROWTH OF HIGH QUALITY PROTEIN CRYSTALS414
  • 4. NA FLUX LPE GROWTH OF BULK GAN CRYSTAL420
  • 5. CONCLUSIONS423
  • ACKNOWLEDGMENTS424
  • REFERENCES424
  • Author Index427
Book details
  • Vendor Elsevier S & T
  • SKU 9780444528780
  • ISBN-13 9780080471358
  • Author Masuhara, Hiroshi; Kawata, Satoshi; Tokunaga, Fumio
  • Category Science
  • Subject Spectroscopy & Spectrum Analysis

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This third volume in the series represents the Proceedings of the 3rd International Nanophotonics Symposium, July 6-8, 2006, Icho-Kaikan, Osaka University, Osaka, Japan. Over a two-day symposium, distinguished scientists from around the world convened to discuss the latest progress in this field and the conclusions have been summarised in Nano Biophotonics: Science and Technology. The contents of this book have been compiled by invited lecturers, research members of the relevant projects/program, and some of general participants. The book has 27 chapters which are classified into 4 parts; nano bio-spectroscopy, nano bio-dynamics, nano bio-processing, and nano bio-devices.

* Bridges the gap between conventional photophysics & photochemistry and nanoscience
* Continuing the series that focuses on 'hot' areas of photochemistry, optics, material science and bioscience