The Language of Shape: The Role of Curvature in Condensed Matter: Physics, Chemistry and Biology

Hyde, S.; Blum, Z.; Landh, T.; Lidin, S.; Ninham, B.W.; Andersson, S.; Larsson, K.

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Table of contents
  • Cover
  • Table of Contentsix
  • Chapter 1. The Mathematics of Curvature1
  • 1.1. Introductory remarks1
  • 1.2 Curvature2
  • 1.3 Differential geometry of surfaces4
  • 1.4 The Gauss map6
  • 1.5 Geodesic curvature and geodesics7
  • 1.6 Torsion8
  • 1.7 The Gauss-Bonnet theorem10
  • 1.8 Topology11
  • 1.9 A provisional catalogue of surface forms14
  • 1.10 A historical perspective18
  • 1.11 Periodic minimal surfaces21
  • 1.12 The Bonnet transformation: the P-surface, the D-surface and the gyroid27
  • 1.13 Parallel surfaces32
  • 1.14 Future directions32
  • Appendix: A catalogue of some minimal surfaces33
  • Mathematical Bibliography40
  • References41
  • Chapter 2. The Lessons of Chemistry43
  • Inorganic Chemistry: From the discrete lattice of crystal symmetry to the continuous manifolds of di43
  • 2.1 The background43
  • 2.2 The unravelling of complex structures44
  • 2.3 Defects46
  • 2.4 The intrinsic curvature of solids49
  • 2.5 Hydrophobic zeolites and adsorption52
  • 2.6 Phase transitions, order and disorder55
  • 2.7 Quantitative analysis of hyperbolic frameworks: silicate densities58
  • 2.8 Tetrahedral frameworks: Three- or two-dimensional structures?63
  • 2.9 Quasicrystals66
  • Organic Chemistry - The Shape of Molecules73
  • 2.10 The hyperbolic nature of sp3 orbitals73
  • 2.11 Organic sculptures: carcerands, crowns, etc.75
  • 2.12 Beyond graphite: fullerenes and schwarzites78
  • Appendix: The Problem of Quasicrystals80
  • References84
  • Chapter 3. Molecular Forces and Self-Assembly87
  • 3.1 The background87
  • 3.3 The background to surface forces96
  • 3.4 Molecular forces in detail98
  • 3.5 A gallimaufry of forces105
  • 3.6 Self-organisation in surfactant solutions113
  • Appendix A: Evolution of concepts on long range molecular forces responsible for organisation and in124
  • Appendix B: Modern concepts of self-assembly128
  • Appendix C: Remarks on the nature of the hydrophobic interaction and water structure129
  • References137
  • Chapter 4. Beyond Flatland: The Geometric Forms due to Self-Assembly141
  • 4.1 Introduction: molecular dimensions and curvature141
  • 4.2 The local geometry of aggregates143
  • 4.3 The composition of surfactant mixtures: the global constraint146
  • 4.4 Bilayers in surfactant-water mixtures149
  • 4.5 Monolayers in surfactant-water mixtures154
  • 4.6 Geometrical physics: bending energy157
  • 4.7 The mesophase behaviour of surfactant- and lipid-water mixtures160
  • 4.8 The hyperbolic realm: cubic and intermediate phases163
  • 4.9 Mesostructure in ternary surfactant-water-oil systems: microemulsions170
  • 4.10 Block copolymer melts: an introduction176
  • 4.11 Copolymer self-assembly177
  • 4.12 Relation between material properties and structure185
  • 4.13 Protein assemblies in bacteria: a mesh phase186
  • 4.14 Self-assembly of chiral molecules187
  • References194
  • Chapter 5. Lipid Self-Assembly and Function In Biological Systems199
  • 5.1 Self-association of lipids in an aqueous environment199
  • 5.2 Cell membranes213
  • References232
  • Chapter 6. Folding and Function In Proteins and DNA237
  • 6.1 Overall features of protein structure237
  • 6.2 α- helix domains239
  • 6.3 α-helix / β- -sheet domains239
  • 6.4 β- sheet domains241
  • 6.5 Membrane proteins242
  • 6.6 Enzymatic action243
  • 6.7 Protein function and dioxin poisoning247
  • 6.8 Geometry in hormone-receptor interactions248
  • 6.9 Self / non-self recognition250
  • 6.10 DNA folding251
  • 6.11 Self-assembly and crystallisation of proteins253
  • References256
  • Chapter 7. Cytomembranes and Cubic Membrane Systems Revisited257
  • 7.1 Membrane organisation257
  • 7.2 Recognition of hyperbolic periodic cytomembrane morphologies in electron microscopic sections259
  • 7.3 The structure and occurrence of cubic membranes266
  • 7.4 Cubic membranes in unicellular organisms: prokaryotes and protozoa272
  • 7.5 Cubic membranes in plants275
  • 7.6 Cubic membranes in fungi284
  • 7.7 Cubic membranes in metazoa286
  • 7.8 Relationships between tubuloreticular structures, annulate lamellae, and cubic membranes314
  • 7.9 Biogenesis of cubic membranes317
  • 7.10 Relationships between cubic membranes and cubic phases321
  • 7.11 Functionalities of cubic membranes323
  • 7.12 Cell space organisation and topology324
  • 7.13 Specific structure-function relations327
  • Abbreviations330
  • References331
  • Chapter 8. Some Miscellaneous Speculations339
  • 8.1 Templating339
  • 8.2 Supra Self-Assembly348
  • 8.3 The origin of life: a role for cubosomes?359
  • 8.4 A final word362
  • References363
  • Index365
Book details
  • Vendor Elsevier S & T
  • SKU 9780444815385
  • ISBN-13 9780080542546
  • Author Hyde, S.; Blum, Z.; Landh, T.; Lidin, S.; Ninham, B.W.; Andersson, S.; Larsson, K.
  • Category Science
  • Subject Physical & Theoretical

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This book develops the thesis that structure and function in a variety of condensed systems - from the atomic assemblies in inorganic frameworks and organic molecules, through molecular self-assemblies to proteins - can be unified when curvature and surface geometry are taken together with molecular shape and forces. An astonishing variety of synthetic and biological assemblies can be accurately modelled and understood in terms of hyperbolic surfaces, whose richness and beauty are only now being revealed by applied mathematicians, physicists, chemists and crystallographers. These surfaces, often close to periodic minimal surfaces, weave and twist through space, carving out interconnected labyrinths whose range of topologies and symmetries challenge the imaginative powers.

The book offers an overview of these structures and structural transformations, convincingly demonstrating their ubiquity in covalent frameworks from zeolites used for cracking oil and pollution control to enzymes and structural proteins, thermotropic and lyotropic bicontinuous mesophases formed by surfactants, detergents and lipids, synthetic block copolymer and protein networks, as well as biological cell assemblies, from muscles to membranes in prokaryotic and eukaryotic cells. The relation between structure and function is analysed in terms of the previously neglected hidden variables of curvature and topology. Thus, the catalytic activity of zeolites and enzymes, the superior material properties of interpenetrating networks in microstructured polymer composites, the transport requirements in cells, the transmission of nerve signals and the folding of DNA can be more easily understood in the light of this.

The text is liberally sprinkled with figures and colour plates, making it accessible to both the beginning graduate student and researchers in condensed matter physics and chemistry, mineralogists, crystallographers and biologists.